CPADS enables comprehensive analysis of drug resistance across 44 cancer types
CPADS integrates data from the Gene Expression Omnibus (GEO), The Cancer Genome Atlas (TCGA), and the Genomics of Drug Sensitivity in Cancer (GDSC) databases, encompassing over 29,000 samples across 44 cancer types and involving 288 drugs. It provides five main analysis modules: differential expression analysis, correlation analysis, pathway analysis, drug analysis, and gene perturbation analysis. These modules enable users to explore gene expression changes, correlations between genes or drugs, pathway enrichment, drug sensitivity, and the impact of genetic perturbations on drug resistance. The differential expression analysis module allows users to compare gene expression levels between control and drug-treated groups or between drug-sensitive and -resistant groups. The correlation analysis module supports both single-gene and multigene correlation studies, revealing how gene expression correlates with drug IC50 values. Pathway analysis is facilitated through Gene Set Enrichmen...